BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014D12SP1|AL426688
(797 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1401 1566 0.0
>3x_Contig1401
Length = 8231
Score = 1566 bits (790), Expect = 0.0
Identities = 797/798 (99%), Gaps = 1/798 (0%)
Strand = Plus / Plus
Query: 1 ctcatcgacaacggtagcggcagtatcgtcatcatcagaatctgtcccaacgtgagtgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ctcatcgacaacggtagcggcagtatcgtcatcatcagaatctgtcccaacgtgagtgtt 580
Query: 61 gttatttgcagtaccattcggtattgcttgaccttcttcctccaaaattaactcatcgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gttatttgcagtaccattcggtattgcttgaccttcttcctccaaaattaactcatcgtg 640
Query: 121 gatattaagtttccctgtagtcttgtacttatgccatacgtttttgaaagtgggtactaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gatattaagtttccctgtagtcttgtacttatgccatacgtttttgaaagtgggtactaa 700
Query: 181 ataaaagatgaacgaagccgtattcaaatacgtgatgaaaaatggtttcctatacgagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ataaaagatgaacgaagccgtattcaaatacgtgatgaaaaatggtttcctatacgagtt 760
Query: 241 atcttcgaagatcatatttatcaggaatgaagacaaaacccataatagaacgaccactcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 atcttcgaagatcatatttatcaggaatgaagacaaaacccataatagaacgaccactcc 820
Query: 301 tagtagtactaaacctagtgtccatttcttggactgcgacctgatcgatccagtcatgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 tagtagtactaaacctagtgtccatttcttggactgcgacctgatcgatccagtcatgct 880
Query: 361 cctgcttatagtattgtatgtgtattgcttaacgcttgaaggttatcagactgccaacgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 cctgcttatagtattgtatgtgtattgcttaacgcttgaaggttatcagactgccaacgg 940
Query: 421 atcactccttaacggcaatcggtatgcgtcccatctcttactttcaatataattatatac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 atcactccttaacggcaatcggtatgcgtcccatctcttactttcaatataattatatac 1000
Query: 481 agtatatatataatattctttttacacagtttttcacatttgataacaattgaagttgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 agtatatatataatattctttttacacagtttttcacatttgataacaattgaagttgca 1060
Query: 541 ataatataattaggtaaattttcaccgaa-gatgtagagttgacaaacgagaaagtttca 599
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1061 ataatataattaggtaaattttcaccgaaggatgtagagttgacaaacgagaaagtttca 1120
Query: 600 agagttggaaaaggggaccacagagtatattcccgacctaaatcacgaaccagaataaca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 agagttggaaaaggggaccacagagtatattcccgacctaaatcacgaaccagaataaca 1180
Query: 660 gctaatgatccctaaccgctgcgtctggttaggcaacttcatcgaagcacaattccatgc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 gctaatgatccctaaccgctgcgtctggttaggcaacttcatcgaagcacaattccatgc 1240
Query: 720 ttcctttcacataaaatgagaaatggttccactggttccttcgacaaagagcatgaaact 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1241 ttcctttcacataaaatgagaaatggttccactggttccttcgacaaagagcatgaaact 1300
Query: 780 aggggaacaagattacta 797
||||||||||||||||||
Sbjct: 1301 aggggaacaagattacta 1318
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6641
Number of Sequences: 1807
Number of extensions: 6641
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 797
length of database: 10,358,551
effective HSP length: 16
effective length of query: 781
effective length of database: 10,329,639
effective search space: 8067448059
effective search space used: 8067448059
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)